Bioconductor Ribosome profiling

Showing : ribosome profiling • reset

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1.1k

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deseq2 differential translation ribosome profiling

updated 5.4 years ago by Michael Love 43k • written 5.4 years ago by katerinadouka91 • 0

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1.6k

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aligning ribosome profiling RNA-Seq

5.5 years ago Crispy • 0

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1.5k

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deseq2 ribosome profiling wald lrt

updated 6.2 years ago by Michael Love 43k • written 6.2 years ago by indrik.wijaya ▴ 20

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2.6k

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deseq2 sequencing ribosome profiling riboseq multiple factor design

updated 6.6 years ago by Michael Love 43k • written 6.6 years ago by kotcha.m ▴ 10

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3.4k

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deseq2 ribosome profiling

updated 6.7 years ago by Michael Love 43k • written 6.7 years ago by xiaozhuo ▴ 10

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1.4k

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R riboseqr ribosome profiling

7.1 years ago bsad • 0

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894

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riboprofiling ribosome profiling

7.5 years ago nicholsonangela7 • 0

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2.2k

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biomart bioconductor grangeslist cds ribosome profiling

updated 7.8 years ago by Hervé Pagès 16k • written 7.8 years ago by Walter F. Baumann ▴ 10

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2.6k

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deseq2 translation efficiency spikes ribosome profiling

8.4 years ago GFM ▴ 20

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1.9k

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riboseqr ribosome profiling

updated 9.0 years ago by Thomas J Hardcastle ▴ 180 • written 9.1 years ago by alper.celik • 0

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1.8k

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R riboseqr ribosome profiling

9.4 years ago ohtack9 • 0

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2.5k

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deseq2 linear model ribosome profiling stats

updated 9.6 years ago by Ryan C. Thompson ★ 7.9k • written 9.6 years ago by Jake ▴ 90

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Comment: Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malf by AB ▴ 110

Force=TRUE did the trick. Thank you.

Comment: www.stats.ox.ac.uk seems to be off, leading to errors/delays when installing pac by DENG • 0

[https://github.com/djunsheep/CRANextra/blob/main/README.md][1] add the following to the `.Rprofile` and `Rprofile.site` # fixing the…

Comment: Transcript ID Mismatch in riboWaltz Annotation Table by shepherl 4.1k

riboWalze is not a Bioconductor package and does not appear to be a Bioconductor function; the maintainer is not guaranteed to be on this …

Answer: Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malf by shepherl 4.1k

What is your `sessionInfo()`? I just tried locally and it works fine so there might have been a bad or interrupted download when initially…

Comment: error in ChAMP loading file by shocked.tick.zyet • 0

Great troubleshooting steps for ChAMP import issues! "ChAMP methylation data import errors" on [Google Search][1] for similar cases. Header…

Votes

Answer: Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malf

Answer: Differential expression of proteins using somascan data

Answer: Surprising behavior for DEXseq dispersion estimate plot?

Answer: Handle zero effective gene length when tximport RSEM results

Handle zero effective gene length when tximport RSEM results

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Scholar to shepherl 4.1k

Popular Question to James W. MacDonald 68k